SNP Profiles matching CC 137

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	AC	CC	GT	CT	GG	AC	CC	AA	CT	AG	AG	AA	CC
1._CC_137	_	_	CC	GT	CT	_	AC	CC	AA	CT	_	_	AA	_
2._CC_137	_	_	CC	GT	CT	_	AC	CC	AA	CT	_	_	AA	_
3._CC_137	_	_	CC	GT	CT	_	AC	CC	AA	CT	_	_	AA	_
4._CC_137	_	_	CC	GT	CT	_	AC	CC	AA	CT	_	_	AA	_
5._RUQ_1637	_	_	CC	GT	CT	_	AC	CC	AA	CT	_	_	AA	_
6._RUQ_1634	_	_	CC	GT	CT	_	AC	CC	AA	CT	_	_	AA	_
7._GC-01-134-7-11	CT	AC	CC	GT	CT	GG	AC	CC	AA	CT	AG	AG	AA	CC
8._GC-01-134-7-11	CT	AC	CC	GT	CT	GG	AC	CC	AA	CT	AG	AG	AA	CC
9._GC-01-134-7-11	CT	AC	CC	GT	CT	GG	AC	CC	AA	CT	AG	AG	AA	CC
10._GC-01-134-7-11	CT	AC	CC	GT	CT	GG	AC	CC	AA	CT	AG	AG	AA	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AG	CC	TT	CC	CC	CC	CT	TT	GG	GG	GT	AC	GG	CC
1._CC_137	AG	CC	TT	CC	CC	_	CT	_	GG	_	_	_	GG	_
2._CC_137	AG	CC	TT	CC	CC	_	CT	_	GG	_	_	_	GG	_
3._CC_137	AG	CC	TT	CC	CC	_	CT	_	GG	_	_	_	GG	_
4._CC_137	AG	CC	TT	CC	CC	_	CT	_	GG	_	_	_	GG	_
5._RUQ_1637	AG	CC	TT	CC	CC	_	CT	_	GG	_	_	_	GG	_
6._RUQ_1634	AG	CC	TT	CC	CC	_	CT	_	GG	_	_	_	GG	_
7._GC-01-134-7-11	AG	CC	TT	CC	CC	CC	CT	CT	GG	GG	GT	AC	GG	CC
8._GC-01-134-7-11	AG	CC	TT	CC	CC	CC	CT	CT	GG	GG	GT	AC	GG	CC
9._GC-01-134-7-11	AG	CC	TT	CC	CC	CC	CT	CT	GG	GG	GT	AC	GG	CC
10._GC-01-134-7-11	AG	CC	TT	CC	CC	CC	CT	CT	GG	GG	GT	AC	GG	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	AA	AG	TT	CT	GT	AG	AT	TT	CT	CT	CT	CG	AG
1._CC_137	CC	_	AG	_	CT	_	_	_	TT	_	_	CT	CG	AG
2._CC_137	CC	_	AG	_	CT	_	_	_	TT	_	_	CT	CG	AG
3._CC_137	CC	_	AG	_	CT	_	_	_	TT	_	_	CT	CG	AG
4._CC_137	CC	_	AG	_	CT	_	_	_	TT	_	_	CT	CG	AG
5._RUQ_1637	CC	_	AG	_	CT	_	_	_	TT	_	_	CT	_	AG
6._RUQ_1634	CC	_	AG	_	CT	_	_	_	TT	_	_	CT	_	AG
7._GC-01-134-7-11	CC	AG	AG	TT	CT	GT	AG	AT	TT	TT	CT	CT	CG	AG
8._GC-01-134-7-11	CC	AG	AG	TT	CT	GT	AG	AT	TT	TT	CT	CT	CG	AG
9._GC-01-134-7-11	CC	AG	AG	TT	CT	GT	AG	AT	TT	TT	CT	CT	CG	AG
10._GC-01-134-7-11	CC	AG	AG	TT	CT	GT	AG	AT	TT	TT	CT	CT	CG	AG

Input profile: CC_137 RUQ_1637

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._CC_137

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1711 6

Dapeng Zhang, 2016

2._CC_137

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1711 5

Dapeng Zhang, 2016

3._CC_137

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1711 2

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

4._CC_137

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1711 1

Dapeng Zhang, 2016

5._CC_137 RUQ_1637

identical
22 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

6._IMC_14 RUQ_1634

identical
22 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

7._CC_137 GC-01-134-7-11

96.4 %
42 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

8._CC_137 GC-01-134-7-11

96.4 %
42 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

9._CC_137 GC-01-134-7-11

96.4 %
42 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

10._CC_137 GC-01-134-7-11

96.4 %
42 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP560	18	TcSNP577	19	TcSNP591	20	TcSNP602
21	TcSNP619	22	TcSNP702	23	TcSNP723	24	TcSNP731	25	TcSNP799
26	TcSNP823	27	TcSNP872	28	TcSNP878	29	TcSNP891	30	TcSNP899
31	TcSNP998	32	TcSNP999	33	TcSNP1060	34	TcSNP1063	35	TcSNP1111
36	TcSNP1126	37	TcSNP1253	38	TcSNP1309	39	TcSNP1439	40	TcSNP1442
41	TcSNP1458	42	TcSNP1484